Viruses in Gut Flora: Understanding the GAPS View

Understand bacteriophages, resident viruses and the animal research cited by GAPS, with clear distinctions for viral activity, symptoms and prescribed care.

Ebonie Garnica Avatar

Affiliate disclosure: Some links may be affiliate links. If you buy through one, I may earn a commission at no extra cost to you. Any paid relationship is identified where it applies. Full disclosure.

Not all viruses have the same role in the gut. Gut and Physiology Syndrome distinguishes bacteriophages, which infect bacteria, from viruses that infect human cells. It also discusses resident viruses, periods of activity and experimental research into interactions among viruses, bacteria and the immune system.[1]

Bacteriophages and Bacteria

Bacteriophages are viruses that infect particular bacteria. The book discusses their use in food production, medicine and equipment-related applications, as well as their presence around the gut’s microbial community. The useful distinction is their bacterial target, rather than treating them as the same thing as a human cold virus.[1]

Campbell-McBride connects bacteriophages with a larger ecological picture: bacteria and their viruses interact within a community. That is why the word “virus” alone does not tell you which cells it affects or what question a study is asking.

Resident Human Viruses

The chapter names herpesvirus and papillomavirus families while discussing organisms that may remain in the body without causing immediate symptoms. It also describes periods of activation and illness. Being a common or persistent resident is not the same as being harmless in every circumstance.[1]

One paper behind the herpesvirus discussion found protection against certain bacterial infections in mice with particular latent viral infections. The species, viral strain and experimental setting belong with that finding. It is not a reason to seek an infection or assume that all human herpesviruses protect their host.[2]

The Norovirus Experiment

The book’s norovirus example also comes from animal research. In the primary study, murine norovirus restored aspects of intestinal structure and immune function in germ-free or antibiotic-treated mice. It supplied some functions associated with commensal bacteria; it did not show that an ordinary human stomach bug universally repairs gut flora.[3]

This matters when the research is brought into a family blog. A study of a particular mouse virus and a person with vomiting or diarrhea are different situations. For the GAPS discussion of illness and recovery food, use the common-cold guide and the fever guide.

What the Earlier Book Adds

In Gut and Psychology Syndrome, Campbell-McBride discusses reports involving measles and possible herpesvirus activity while asking how many other viruses and microbes had not yet been identified or studied. Her conclusion returns to beneficial-flora control and gut-wall integrity. The newer book develops that broader ecosystem view, considering viruses alongside other life forms.[4]

The question about unknown organisms remains part of the argument. It should not be turned into certainty about an unidentified infection in a reader, or into a claim that one virus explains the whole GAPS picture.

Carriage, Activity and Treatment

The book expresses concern about long courses of antiviral medication and the resident microbial community. Those are the author’s clinical observations and ecological concerns. They do not establish that a prescribed antiviral should be stopped or that active viral disease can be identified from diet symptoms.[1]

Keep the questions separate: which virus is involved, what the test measured, whether there is active illness and why a treatment was prescribed. A general explanation of gut ecology cannot supply those answers for one person.

Keep Reading

The chronic hepatitis B guide addresses one specific passage and its clinical scope. Gut-flora protection covers the barrier and microbial competition, while the immune-system guide connects the wider functions.

For a companion to this topic, look for Understanding & Preparing for the GAPS Diet in my course catalog.

Return to the GAPS gut-flora guide for the wider picture and the links to each part of this series.

References

  1. Campbell-McBride, N. Gut and Physiology Syndrome (2020), “Viruses,” bacteriophages, resident viruses and antiviral observations, printed pages 23–24.
  2. Barton ES et al. Herpesvirus latency confers symbiotic protection from bacterial infection. Nature. 2007;447:326–329. Mouse research.
  3. Kernbauer E, Ding Y, Cadwell K. An enteric virus can replace the beneficial function of commensal bacteria. Nature. 2014;516:94–98. Mouse research.
  4. Campbell-McBride, N. Gut and Psychology Syndrome, 2004 English edition, PDF pages 48–49; corresponding discussion in the 2015 expanded German edition. Gut and Physiology Syndrome (2020), ecosystem and “Viruses” sections.

Keep Reading

Leave a comment

Your email address will not be published. Required fields are marked *